BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029E04LP1|AL429066
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1766 1733 0.0
>3x_Contig1766
Length = 23951
Score = 1733 bits (874), Expect = 0.0
Identities = 888/890 (99%), Gaps = 2/890 (0%)
Strand = Plus / Plus
Query: 1 atcggtttttattcaaaggcttgtaacaggaaaaaaggcaaaagcgattcatgtctccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4631 atcggtttttattcaaaggcttgtaacaggaaaaaaggcaaaagcgattcatgtctccag 4690
Query: 61 taatttcttttaagtatccccagatgtaattgaatacgcaaacatgttattattatctat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4691 taatttcttttaagtatccccagatgtaattgaatacgcaaacatgttattattatctat 4750
Query: 121 atctccgcggagttcatgaataatggtgtaattattcgcaattagtccaaggtcgagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4751 atctccgcggagttcatgaataatggtgtaattattcgcaattagtccaaggtcgagagc 4810
Query: 181 tagcacaaccacgggtactttgtaatgtcaaccaagaaagctttaaccgaaattctgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4811 tagcacaaccacgggtactttgtaatgtcaaccaagaaagctttaaccgaaattctgggg 4870
Query: 241 atcaagtatcctattctagtagcaccaatggccggagtatccacaccggaattggcagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4871 atcaagtatcctattctagtagcaccaatggccggagtatccacaccggaattggcagca 4930
Query: 301 gctgtatctaattctggtggtttaggatcgcttggacttggagcaagttctgtcgaaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4931 gctgtatctaattctggtggtttaggatcgcttggacttggagcaagttctgtcgaaaaa 4990
Query: 361 gcaagaaacgccataattgcgacgcagaagctaaccaagagtccatttcaggtcaatttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4991 gcaagaaacgccataattgcgacgcagaagctaaccaagagtccatttcaggtcaatttc 5050
Query: 421 ttctgtcatgagccagaagagttgaacgtggaggtggcacgcaattggatcgaatatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5051 ttctgtcatgagccagaagagttgaacgtggaggtggcacgcaattggatcgaatatttg 5110
Query: 481 aagccaatatttgctcggttccatactaaacctgaaaaggaattaaccaagatctataac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5111 aagccaatatttgctcggttccatactaaacctgaaaaggaattaaccaagatctataac 5170
Query: 541 agtttcttggaagatccagaaatgcttgcagtggtgttagaattgaaaccgaaagtggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5171 agtttcttggaagatccagaaatgcttgcagtggtgttagaattgaaaccgaaagtggtt 5230
Query: 601 agtttccatttcggagtgccatctgcgagcactttaaaatcattgaagcaagcgggagtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5231 agtttccatttcggagtgccatctgcgagcactttaaaatcattgaagcaagcgggagtt 5290
Query: 661 gtcacgatggcaagtgtgactcaattaagtgaggctgaattggctattgggcacgggata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5291 gtcacgatggcaagtgtgactcaattaagtgaggctgaattggctattgggcacgggata 5350
Query: 721 gatatcctaatcgctcaaggtgtcgaagcggggtggtcatcgggggaatgtttaacgcat 780
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 5351 gatatcctaatcgctcaaggtgtcgaagc-gggtggtcatc-ggggaatgtttaacgcat 5408
Query: 781 cattagatccggcaatatccacgagagatttggtgaaattactaaaagcaaagttgggca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5409 cattagatccggcaatatccacgagagatttggtgaaattactaaaagcaaagttgggca 5468
Query: 841 caactattcctatagtagcagcaggaggaataatgtctggtcaagatatt 890
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5469 caactattcctatagtagcagcaggaggaataatgtctggtcaagatatt 5518
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5876
Number of Sequences: 1807
Number of extensions: 5876
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)